Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm43378-201ENSMUST00000199336 582 ntBASIC11.25□□□□□ -0.61
ClpbQ60649 Gm8956-201ENSMUST00000203939 825 ntBASIC11.25□□□□□ -0.61
ClpbQ60649 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Gm4607-201ENSMUST00000206649 577 ntBASIC11.25□□□□□ -0.61
ClpbQ60649 Gm4157-201ENSMUST00000211647 679 ntBASIC11.25□□□□□ -0.61
ClpbQ60649 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.25□□□□□ -0.61
ClpbQ60649 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.25□□□□□ -0.61
ClpbQ60649 Gm270-201ENSMUST00000223010 976 ntBASIC11.25□□□□□ -0.61
ClpbQ60649 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.25□□□□□ -0.61
ClpbQ60649 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
ClpbQ60649 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.25□□□□□ -0.61
ClpbQ60649 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
ClpbQ60649 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.25□□□□□ -0.61
ClpbQ60649 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
ClpbQ60649 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.25□□□□□ -0.61
ClpbQ60649 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.25□□□□□ -0.61
ClpbQ60649 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.24□□□□□ -0.61
ClpbQ60649 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
ClpbQ60649 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
ClpbQ60649 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.24□□□□□ -0.61
ClpbQ60649 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
ClpbQ60649 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Gm12566-201ENSMUST00000121479 359 ntBASIC11.24□□□□□ -0.61
ClpbQ60649 Gm12164-201ENSMUST00000121695 551 ntBASIC11.24□□□□□ -0.61
ClpbQ60649 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.24□□□□□ -0.61
ClpbQ60649 Gm18734-201ENSMUST00000172937 808 ntBASIC11.24□□□□□ -0.61
ClpbQ60649 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.24□□□□□ -0.61
ClpbQ60649 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Gm26448-201ENSMUST00000082446 203 ntBASIC11.24□□□□□ -0.61
ClpbQ60649 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
ClpbQ60649 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.24□□□□□ -0.61
ClpbQ60649 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
ClpbQ60649 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.24□□□□□ -0.61
ClpbQ60649 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpbQ60649 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
ClpbQ60649 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
ClpbQ60649 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
ClpbQ60649 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
ClpbQ60649 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.23□□□□□ -0.61
ClpbQ60649 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.23□□□□□ -0.61
ClpbQ60649 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.23□□□□□ -0.61
ClpbQ60649 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.23□□□□□ -0.61
ClpbQ60649 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.23□□□□□ -0.61
ClpbQ60649 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.23□□□□□ -0.61
ClpbQ60649 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.23□□□□□ -0.61
ClpbQ60649 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.23□□□□□ -0.61
ClpbQ60649 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClpbQ60649 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.23□□□□□ -0.61
ClpbQ60649 Mir6979-201ENSMUST00000183927 56 ntBASIC11.23□□□□□ -0.61
ClpbQ60649 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
ClpbQ60649 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.23□□□□□ -0.61
ClpbQ60649 AU022133-201ENSMUST00000200601 873 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms