Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm15636-201ENSMUST00000119205 668 ntBASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm15610-201ENSMUST00000120584 195 ntBASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm24140-201ENSMUST00000122773 326 ntBASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm26119-201ENSMUST00000175601 104 ntBASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm21631-201ENSMUST00000195041 754 ntBASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm38135-201ENSMUST00000195068 502 ntBASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm9523-201ENSMUST00000199146 1159 ntBASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm19927-201ENSMUST00000185792 781 ntBASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 AC159006.3-201ENSMUST00000226918 664 ntBASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vps13aQ5H8C4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Gm12774-201ENSMUST00000117881 416 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 H2afy3-201ENSMUST00000151919 1112 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Gm20495-201ENSMUST00000173902 235 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Mir3100-201ENSMUST00000174918 65 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Gm7815-201ENSMUST00000196104 832 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 AC154433.1-201ENSMUST00000224401 1183 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 AC134913.2-201ENSMUST00000225017 771 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Gm26047-201ENSMUST00000157308 113 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Gm28671-201ENSMUST00000187036 692 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Gm26047-202ENSMUST00000198840 115 ntBASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vps13aQ5H8C4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gm3945-201ENSMUST00000196637 683 ntBASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gm32102-201ENSMUST00000196885 241 ntBASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gm19228-201ENSMUST00000214030 717 ntBASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms