Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm14247-201ENSMUST00000120950 237 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Mir7115-201ENSMUST00000184275 64 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 AC132881.1-201ENSMUST00000223780 1062 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm15539-201ENSMUST00000118452 566 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm29272-201ENSMUST00000185476 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21919-201ENSMUST00000185653 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm28446-201ENSMUST00000186508 694 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm28680-201ENSMUST00000186743 480 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21824-201ENSMUST00000186810 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21862-201ENSMUST00000186957 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21796-201ENSMUST00000187116 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21795-201ENSMUST00000187263 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm28814-201ENSMUST00000187334 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21720-201ENSMUST00000187428 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm28746-201ENSMUST00000187453 380 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm20827-201ENSMUST00000187928 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21766-201ENSMUST00000187962 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21837-201ENSMUST00000188117 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21829-201ENSMUST00000188787 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21892-201ENSMUST00000189182 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21777-201ENSMUST00000189307 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm28247-201ENSMUST00000189329 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm28350-201ENSMUST00000189453 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21906-201ENSMUST00000189760 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm29411-201ENSMUST00000189889 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21717-201ENSMUST00000189902 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21765-201ENSMUST00000189913 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21895-201ENSMUST00000189997 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21734-201ENSMUST00000190346 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21902-201ENSMUST00000190361 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm29029-201ENSMUST00000190520 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21898-201ENSMUST00000190727 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm29300-201ENSMUST00000190738 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm20793-201ENSMUST00000190779 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm28879-201ENSMUST00000190973 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21752-201ENSMUST00000191023 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm28841-201ENSMUST00000191284 695 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21813-201ENSMUST00000191291 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21878-201ENSMUST00000191365 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21855-201ENSMUST00000191596 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm20833-201ENSMUST00000192708 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21907-201ENSMUST00000192989 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm20928-201ENSMUST00000192992 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm20851-201ENSMUST00000193038 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm37476-201ENSMUST00000193046 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21678-201ENSMUST00000193567 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21768-201ENSMUST00000194103 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm20836-201ENSMUST00000194582 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm21660-201ENSMUST00000195789 696 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm18555-201ENSMUST00000197935 584 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Gm26132-201ENSMUST00000083166 148 ntBASIC10.42□□□□□ -0.74
Chd8Q09XV5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms