Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.64□□□□□ -0.39
Col9a2Q07643 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Col9a2Q07643 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Col9a2Q07643 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Gm9089-201ENSMUST00000122027 526 ntBASIC12.64□□□□□ -0.39
Col9a2Q07643 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.64□□□□□ -0.39
Col9a2Q07643 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.64□□□□□ -0.39
Col9a2Q07643 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Gm15744-201ENSMUST00000161734 213 ntBASIC12.64□□□□□ -0.39
Col9a2Q07643 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col9a2Q07643 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col9a2Q07643 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Gm8894-201ENSMUST00000074642 666 ntBASIC12.64□□□□□ -0.39
Col9a2Q07643 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.64□□□□□ -0.39
Col9a2Q07643 Gm5451-201ENSMUST00000080545 579 ntBASIC12.64□□□□□ -0.39
Col9a2Q07643 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Col9a2Q07643 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col9a2Q07643 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col9a2Q07643 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.64□□□□□ -0.39
Col9a2Q07643 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a2Q07643 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.63□□□□□ -0.39
Col9a2Q07643 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm25880-201ENSMUST00000104331 132 ntBASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm15615-201ENSMUST00000118876 198 ntBASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm12990-201ENSMUST00000120372 468 ntBASIC12.63□□□□□ -0.39
Col9a2Q07643 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm13182-201ENSMUST00000122241 312 ntBASIC12.63□□□□□ -0.39
Col9a2Q07643 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm23153-201ENSMUST00000175323 313 ntBASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.63□□□□□ -0.39
Col9a2Q07643 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Col9a2Q07643 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm25517-201ENSMUST00000083865 134 ntBASIC12.63□□□□□ -0.39
Col9a2Q07643 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col9a2Q07643 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.63□□□□□ -0.39
Col9a2Q07643 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a2Q07643 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.62□□□□□ -0.39
Col9a2Q07643 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms