Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm44506-201ENSMUST00000206278 965 ntBASIC11.87□□□□□ -0.51
Col9a1Q05722 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm9797-202ENSMUST00000218003 294 ntBASIC11.87□□□□□ -0.51
Col9a1Q05722 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.87□□□□□ -0.51
Col9a1Q05722 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.87□□□□□ -0.51
Col9a1Q05722 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col9a1Q05722 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Col9a1Q05722 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col9a1Q05722 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm6755-201ENSMUST00000100598 864 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm5046-201ENSMUST00000100608 611 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm6740-201ENSMUST00000100617 864 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Vmn1r-ps110-201ENSMUST00000117530 1094 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm12774-201ENSMUST00000117881 416 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm12664-201ENSMUST00000118306 913 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm13438-201ENSMUST00000120100 573 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm14503-201ENSMUST00000130337 1164 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm25492-201ENSMUST00000157383 129 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm24239-201ENSMUST00000157791 255 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm16571-201ENSMUST00000159112 291 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm8815-201ENSMUST00000173809 620 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm18012-201ENSMUST00000204558 773 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm7443-201ENSMUST00000206355 378 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm6518-201ENSMUST00000208450 342 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm7242-201ENSMUST00000221134 705 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm26670-202ENSMUST00000226862 340 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm17541-201ENSMUST00000080062 525 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.86□□□□□ -0.51
Col9a1Q05722 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.86□□□□□ -0.51
Col9a1Q05722 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col9a1Q05722 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 243.4 ms