Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps45P97390 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vps45P97390 Gm6114-201ENSMUST00000182472 968 ntBASIC12.12□□□□□ -0.47
Vps45P97390 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps45P97390 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps45P97390 Gm28324-201ENSMUST00000187913 264 ntBASIC12.12□□□□□ -0.47
Vps45P97390 Gm37246-201ENSMUST00000192665 835 ntBASIC12.12□□□□□ -0.47
Vps45P97390 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps45P97390 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.12□□□□□ -0.47
Vps45P97390 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Ginm1-202ENSMUST00000065124 300 ntBASIC12.12□□□□□ -0.47
Vps45P97390 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vps45P97390 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps45P97390 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps45P97390 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.12□□□□□ -0.47
Vps45P97390 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vps45P97390 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.11□□□□□ -0.47
Vps45P97390 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps45P97390 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.11□□□□□ -0.47
Vps45P97390 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vps45P97390 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Vps45P97390 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps45P97390 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.11□□□□□ -0.47
Vps45P97390 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps45P97390 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Gm24891-201ENSMUST00000104391 136 ntBASIC12.11□□□□□ -0.47
Vps45P97390 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.11□□□□□ -0.47
Vps45P97390 Gm12196-201ENSMUST00000120954 262 ntBASIC12.11□□□□□ -0.47
Vps45P97390 Gm11675-201ENSMUST00000121873 832 ntBASIC12.11□□□□□ -0.47
Vps45P97390 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps45P97390 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.11□□□□□ -0.47
Vps45P97390 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.11□□□□□ -0.47
Vps45P97390 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Gm8343-201ENSMUST00000182705 994 ntBASIC12.11□□□□□ -0.47
Vps45P97390 Mir6546-201ENSMUST00000184460 62 ntBASIC12.11□□□□□ -0.47
Vps45P97390 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Vps45P97390 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.11□□□□□ -0.47
Vps45P97390 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps45P97390 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps45P97390 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.11□□□□□ -0.47
Vps45P97390 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vps45P97390 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps45P97390 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps45P97390 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps45P97390 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.11□□□□□ -0.47
Vps45P97390 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.11□□□□□ -0.47
Vps45P97390 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vps45P97390 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vps45P97390 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.1□□□□□ -0.47
Vps45P97390 Gm11340-201ENSMUST00000119226 412 ntBASIC12.1□□□□□ -0.47
Vps45P97390 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.1□□□□□ -0.47
Vps45P97390 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps45P97390 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms