Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.28□□□□□ -0.76
Lsm6P62313 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Lsm6P62313 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Lsm6P62313 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Lsm6P62313 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Lsm6P62313 Gm26047-201ENSMUST00000157308 113 ntBASIC10.28□□□□□ -0.76
Lsm6P62313 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Gm4310-201ENSMUST00000177847 889 ntBASIC10.28□□□□□ -0.76
Lsm6P62313 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Mir8093-201ENSMUST00000185043 137 ntBASIC10.28□□□□□ -0.76
Lsm6P62313 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Lsm6P62313 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Gm26047-202ENSMUST00000198840 115 ntBASIC10.28□□□□□ -0.76
Lsm6P62313 Gm44262-201ENSMUST00000204969 372 ntBASIC10.28□□□□□ -0.76
Lsm6P62313 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm6P62313 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Lsm6P62313 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Lsm6P62313 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Lsm6P62313 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Lsm6P62313 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.28□□□□□ -0.76
Lsm6P62313 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm6P62313 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.28□□□□□ -0.76
Lsm6P62313 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm6P62313 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Lsm6P62313 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Lsm6P62313 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.27□□□□□ -0.76
Lsm6P62313 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.76
Lsm6P62313 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Lsm6P62313 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Lsm6P62313 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.77
Lsm6P62313 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Lsm6P62313 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.27□□□□□ -0.77
Lsm6P62313 Gm11509-201ENSMUST00000117358 325 ntBASIC10.27□□□□□ -0.77
Lsm6P62313 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.27□□□□□ -0.77
Lsm6P62313 Gm15207-201ENSMUST00000119259 442 ntBASIC10.27□□□□□ -0.77
Lsm6P62313 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.27□□□□□ -0.77
Lsm6P62313 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.27□□□□□ -0.77
Lsm6P62313 Gm24749-201ENSMUST00000157838 343 ntBASIC10.27□□□□□ -0.77
Lsm6P62313 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Lsm6P62313 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Lsm6P62313 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.27□□□□□ -0.77
Lsm6P62313 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.27□□□□□ -0.77
Lsm6P62313 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Lsm6P62313 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Lsm6P62313 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.27□□□□□ -0.77
Lsm6P62313 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.27□□□□□ -0.77
Lsm6P62313 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Lsm6P62313 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Lsm6P62313 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Lsm6P62313 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.27□□□□□ -0.77
Lsm6P62313 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.27□□□□□ -0.77
Lsm6P62313 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.27□□□□□ -0.77
Lsm6P62313 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.27□□□□□ -0.77
Lsm6P62313 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Lsm6P62313 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.27□□□□□ -0.77
Lsm6P62313 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm6P62313 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.26□□□□□ -0.77
Lsm6P62313 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms