Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.75□□□□□ -0.05
Msh6P54276 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Msh6P54276 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Msh6P54276 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Msh6P54276 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Msh6P54276 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.74□□□□□ -0.05
Msh6P54276 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Gm11500-201ENSMUST00000118237 601 ntBASIC14.74□□□□□ -0.05
Msh6P54276 Gm6322-201ENSMUST00000118789 1004 ntBASIC14.74□□□□□ -0.05
Msh6P54276 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC14.74□□□□□ -0.05
Msh6P54276 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Gm17192-201ENSMUST00000169031 511 ntBASIC14.74□□□□□ -0.05
Msh6P54276 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
Msh6P54276 Gm43163-201ENSMUST00000196571 442 ntBASIC14.74□□□□□ -0.05
Msh6P54276 Gm43380-201ENSMUST00000200421 220 ntBASIC14.74□□□□□ -0.05
Msh6P54276 Gm7082-201ENSMUST00000209880 969 ntBASIC14.74□□□□□ -0.05
Msh6P54276 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Msh6P54276 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Msh6P54276 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC14.74□□□□□ -0.05
Msh6P54276 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.74□□□□□ -0.05
Msh6P54276 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Msh6P54276 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.74□□□□□ -0.05
Msh6P54276 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Msh6P54276 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Msh6P54276 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Msh6P54276 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC14.73□□□□□ -0.05
Msh6P54276 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Msh6P54276 Gm24791-201ENSMUST00000104284 131 ntBASIC14.73□□□□□ -0.05
Msh6P54276 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Gm11560-201ENSMUST00000117567 948 ntBASIC14.73□□□□□ -0.05
Msh6P54276 Gm13351-201ENSMUST00000118087 414 ntBASIC14.73□□□□□ -0.05
Msh6P54276 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC14.73□□□□□ -0.05
Msh6P54276 Gm26982-201ENSMUST00000182250 1151 ntBASIC14.73□□□□□ -0.05
Msh6P54276 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.73□□□□□ -0.05
Msh6P54276 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Msh6P54276 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Msh6P54276 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Msh6P54276 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Msh6P54276 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.73□□□□□ -0.05
Msh6P54276 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Msh6P54276 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC14.73□□□□□ -0.05
Msh6P54276 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Gm15003-201ENSMUST00000118884 446 ntBASIC14.73□□□□□ -0.05
Msh6P54276 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC14.73□□□□□ -0.05
Msh6P54276 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh6P54276 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Msh6P54276 Gm26047-201ENSMUST00000157308 113 ntBASIC14.73□□□□□ -0.05
Msh6P54276 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.73□□□□□ -0.05
Msh6P54276 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms