Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cux1P53564 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cux1P53564 Gm25569-201ENSMUST00000157175 131 ntBASIC17.7■□□□□ 0.42
Cux1P53564 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC17.7■□□□□ 0.42
Cux1P53564 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cux1P53564 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cux1P53564 Gm42779-201ENSMUST00000198807 406 ntBASIC17.7■□□□□ 0.42
Cux1P53564 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cux1P53564 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC17.7■□□□□ 0.42
Cux1P53564 CT025618.1-203ENSMUST00000227008 589 ntBASIC17.7■□□□□ 0.42
Cux1P53564 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cux1P53564 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cux1P53564 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cux1P53564 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cux1P53564 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Cux1P53564 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cux1P53564 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cux1P53564 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cux1P53564 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Cux1P53564 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cux1P53564 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 CT025624.1-201ENSMUST00000224007 2700 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm37269-201ENSMUST00000193906 1891 ntBASIC17.69■□□□□ 0.42
Cux1P53564 AC174797.1-201ENSMUST00000224339 1649 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 Gm5822-201ENSMUST00000161562 1378 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC17.69■□□□□ 0.42
Cux1P53564 Gm23400-201ENSMUST00000174994 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm23647-201ENSMUST00000175042 109 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm26463-201ENSMUST00000175065 101 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm24332-201ENSMUST00000175102 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm25959-201ENSMUST00000175112 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm22475-201ENSMUST00000175169 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm22903-201ENSMUST00000175193 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm25070-201ENSMUST00000175237 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm24159-201ENSMUST00000175264 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm25299-201ENSMUST00000175283 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm23798-201ENSMUST00000175560 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm23802-201ENSMUST00000175565 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Rn5s-201ENSMUST00000177555 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s108-201ENSMUST00000177575 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s121-201ENSMUST00000177589 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm25708-201ENSMUST00000177687 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s146-201ENSMUST00000177889 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm22109-201ENSMUST00000177995 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm24370-201ENSMUST00000178007 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm22291-201ENSMUST00000178027 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s141-201ENSMUST00000178066 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm23049-201ENSMUST00000178068 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm23284-201ENSMUST00000178069 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s100-201ENSMUST00000178106 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm28019-201ENSMUST00000178138 101 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s111-201ENSMUST00000178203 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm25571-201ENSMUST00000178322 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm25355-201ENSMUST00000178456 101 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm24975-201ENSMUST00000178492 101 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s105-201ENSMUST00000178499 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s149-201ENSMUST00000178520 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s103-201ENSMUST00000178755 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s123-201ENSMUST00000178804 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s142-201ENSMUST00000178820 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s144-201ENSMUST00000178859 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm23189-201ENSMUST00000178954 102 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s139-201ENSMUST00000178975 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s134-201ENSMUST00000178983 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s136-201ENSMUST00000179080 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm25018-201ENSMUST00000179081 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s104-201ENSMUST00000179107 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s113-201ENSMUST00000179143 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s133-201ENSMUST00000179275 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s117-201ENSMUST00000179431 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm25212-201ENSMUST00000179432 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s138-201ENSMUST00000179476 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s122-201ENSMUST00000179500 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s143-201ENSMUST00000179542 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s107-201ENSMUST00000179704 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm25100-201ENSMUST00000179750 101 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm26391-201ENSMUST00000179843 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm23064-201ENSMUST00000179866 101 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s110-201ENSMUST00000179995 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s128-201ENSMUST00000180096 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 n-R5s124-201ENSMUST00000180334 119 ntBASIC17.69■□□□□ 0.42
Cux1P53564 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cux1P53564 Gm37452-201ENSMUST00000194416 1160 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 Gm14005-208ENSMUST00000223654 681 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 Gm5449-201ENSMUST00000081132 357 ntBASIC17.69■□□□□ 0.42
Cux1P53564 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 Gm24089-201ENSMUST00000093696 109 ntBASIC17.69■□□□□ 0.42
Cux1P53564 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cux1P53564 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cux1P53564 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms