Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pdx1P52946 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pdx1P52946 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdx1P52946 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pdx1P52946 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pdx1P52946 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pdx1P52946 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pdx1P52946 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Pdx1P52946 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Pdx1P52946 Gm12579-201ENSMUST00000118040 783 ntBASIC11.55□□□□□ -0.56
Pdx1P52946 Gm11783-201ENSMUST00000119549 885 ntBASIC11.55□□□□□ -0.56
Pdx1P52946 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.55□□□□□ -0.56
Pdx1P52946 Gm23085-201ENSMUST00000157849 293 ntBASIC11.55□□□□□ -0.56
Pdx1P52946 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.55□□□□□ -0.56
Pdx1P52946 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pdx1P52946 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pdx1P52946 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Gm37246-201ENSMUST00000192665 835 ntBASIC11.55□□□□□ -0.56
Pdx1P52946 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.55□□□□□ -0.56
Pdx1P52946 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.55□□□□□ -0.56
Pdx1P52946 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.55□□□□□ -0.56
Pdx1P52946 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pdx1P52946 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.55□□□□□ -0.56
Pdx1P52946 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pdx1P52946 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Pdx1P52946 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pdx1P52946 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Pdx1P52946 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdx1P52946 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.54□□□□□ -0.56
Pdx1P52946 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.54□□□□□ -0.56
Pdx1P52946 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.54□□□□□ -0.56
Pdx1P52946 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.54□□□□□ -0.56
Pdx1P52946 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.54□□□□□ -0.56
Pdx1P52946 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.54□□□□□ -0.56
Pdx1P52946 Gm37466-201ENSMUST00000195692 652 ntBASIC11.54□□□□□ -0.56
Pdx1P52946 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.54□□□□□ -0.56
Pdx1P52946 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.54□□□□□ -0.56
Pdx1P52946 Gm19208-201ENSMUST00000213861 912 ntBASIC11.54□□□□□ -0.56
Pdx1P52946 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.54□□□□□ -0.56
Pdx1P52946 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.54□□□□□ -0.56
Pdx1P52946 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Pdx1P52946 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Pdx1P52946 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.54□□□□□ -0.56
Pdx1P52946 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Pdx1P52946 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.54□□□□□ -0.56
Pdx1P52946 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pdx1P52946 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.54□□□□□ -0.56
Pdx1P52946 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms