Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx1P48377 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Rfx1P48377 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.93□□□□□ -0.18
Rfx1P48377 Gm23931-201ENSMUST00000103842 109 ntBASIC13.93□□□□□ -0.18
Rfx1P48377 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.93□□□□□ -0.18
Rfx1P48377 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.93□□□□□ -0.18
Rfx1P48377 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.93□□□□□ -0.18
Rfx1P48377 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.93□□□□□ -0.18
Rfx1P48377 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.93□□□□□ -0.18
Rfx1P48377 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.93□□□□□ -0.18
Rfx1P48377 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.93□□□□□ -0.18
Rfx1P48377 AC125409.1-201ENSMUST00000223213 3370 ntBASIC13.93□□□□□ -0.18
Rfx1P48377 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx1P48377 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rfx1P48377 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.92□□□□□ -0.18
Rfx1P48377 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rfx1P48377 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Gm43522-201ENSMUST00000196697 1922 ntBASIC13.92□□□□□ -0.18
Rfx1P48377 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.92□□□□□ -0.18
Rfx1P48377 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
Rfx1P48377 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rfx1P48377 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Gm13226-201ENSMUST00000117838 404 ntBASIC13.92□□□□□ -0.18
Rfx1P48377 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.92□□□□□ -0.18
Rfx1P48377 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Gm45784-201ENSMUST00000188360 142 ntBASIC13.92□□□□□ -0.18
Rfx1P48377 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Rfx1P48377 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rfx1P48377 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.92□□□□□ -0.18
Rfx1P48377 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.92□□□□□ -0.18
Rfx1P48377 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rfx1P48377 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rfx1P48377 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rfx1P48377 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Rfx1P48377 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.92□□□□□ -0.18
Rfx1P48377 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rfx1P48377 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.92□□□□□ -0.18
Rfx1P48377 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx1P48377 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rfx1P48377 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.91□□□□□ -0.18
Rfx1P48377 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx1P48377 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rfx1P48377 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx1P48377 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rfx1P48377 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC13.91□□□□□ -0.18
Rfx1P48377 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx1P48377 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Rfx1P48377 Btrc-209ENSMUST00000224478 2194 ntBASIC13.91□□□□□ -0.18
Rfx1P48377 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx1P48377 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.91□□□□□ -0.18
Rfx1P48377 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.91□□□□□ -0.18
Rfx1P48377 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx1P48377 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.91□□□□□ -0.18
Rfx1P48377 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.91□□□□□ -0.18
Rfx1P48377 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.91□□□□□ -0.18
Rfx1P48377 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.91□□□□□ -0.18
Rfx1P48377 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rfx1P48377 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.91□□□□□ -0.18
Rfx1P48377 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.91□□□□□ -0.18
Rfx1P48377 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx1P48377 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx1P48377 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx1P48377 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Rfx1P48377 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.91□□□□□ -0.18
Rfx1P48377 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rfx1P48377 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx1P48377 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx1P48377 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms