Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Slc6a1P31648 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Slc6a1P31648 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.07□□□□□ -0.8
Slc6a1P31648 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.07□□□□□ -0.8
Slc6a1P31648 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Slc6a1P31648 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Slc6a1P31648 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.07□□□□□ -0.8
Slc6a1P31648 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Slc6a1P31648 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Mir1247-201ENSMUST00000116706 82 ntBASIC10.06□□□□□ -0.8
Slc6a1P31648 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.06□□□□□ -0.8
Slc6a1P31648 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.06□□□□□ -0.8
Slc6a1P31648 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.06□□□□□ -0.8
Slc6a1P31648 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Slc6a1P31648 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.06□□□□□ -0.8
Slc6a1P31648 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.06□□□□□ -0.8
Slc6a1P31648 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.06□□□□□ -0.8
Slc6a1P31648 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Slc6a1P31648 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Slc6a1P31648 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.05□□□□□ -0.8
Slc6a1P31648 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Slc6a1P31648 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm24830-201ENSMUST00000102024 166 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm23931-201ENSMUST00000103842 109 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm15198-201ENSMUST00000117283 177 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm11964-201ENSMUST00000120982 444 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.05□□□□□ -0.8
Slc6a1P31648 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.05□□□□□ -0.8
Slc6a1P31648 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.05□□□□□ -0.8
Slc6a1P31648 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm18304-201ENSMUST00000189162 546 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm43179-201ENSMUST00000198797 275 ntBASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms