Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.39□□□□□ -0.27
Vcam1P29533 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.39□□□□□ -0.27
Vcam1P29533 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
Vcam1P29533 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.39□□□□□ -0.27
Vcam1P29533 Gm35960-201ENSMUST00000202712 767 ntBASIC13.39□□□□□ -0.27
Vcam1P29533 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.39□□□□□ -0.27
Vcam1P29533 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Vcam1P29533 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.39□□□□□ -0.27
Vcam1P29533 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.39□□□□□ -0.27
Vcam1P29533 Lect2-202ENSMUST00000225183 823 ntBASIC13.39□□□□□ -0.27
Vcam1P29533 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.39□□□□□ -0.27
Vcam1P29533 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.39□□□□□ -0.27
Vcam1P29533 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Vcam1P29533 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.39□□□□□ -0.27
Vcam1P29533 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.39□□□□□ -0.27
Vcam1P29533 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vcam1P29533 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vcam1P29533 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Vcam1P29533 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.39□□□□□ -0.27
Vcam1P29533 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.39□□□□□ -0.27
Vcam1P29533 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vcam1P29533 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.38□□□□□ -0.27
Vcam1P29533 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vcam1P29533 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.38□□□□□ -0.27
Vcam1P29533 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vcam1P29533 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.38□□□□□ -0.27
Vcam1P29533 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.38□□□□□ -0.27
Vcam1P29533 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Vcam1P29533 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Vcam1P29533 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Vcam1P29533 Gm12218-201ENSMUST00000117666 399 ntBASIC13.38□□□□□ -0.27
Vcam1P29533 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.38□□□□□ -0.27
Vcam1P29533 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vcam1P29533 Gm12791-201ENSMUST00000120788 655 ntBASIC13.38□□□□□ -0.27
Vcam1P29533 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.38□□□□□ -0.27
Vcam1P29533 Gm24992-201ENSMUST00000157412 130 ntBASIC13.38□□□□□ -0.27
Vcam1P29533 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.38□□□□□ -0.27
Vcam1P29533 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.38□□□□□ -0.27
Vcam1P29533 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.38□□□□□ -0.27
Vcam1P29533 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.38□□□□□ -0.27
Vcam1P29533 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.38□□□□□ -0.27
Vcam1P29533 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.38□□□□□ -0.27
Vcam1P29533 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.38□□□□□ -0.27
Vcam1P29533 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.38□□□□□ -0.27
Vcam1P29533 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vcam1P29533 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Vcam1P29533 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Paupar-201ENSMUST00000194826 3482 ntBASIC13.38□□□□□ -0.27
Vcam1P29533 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vcam1P29533 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vcam1P29533 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcam1P29533 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vcam1P29533 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vcam1P29533 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vcam1P29533 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vcam1P29533 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.37□□□□□ -0.27
Vcam1P29533 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.37□□□□□ -0.27
Vcam1P29533 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.37□□□□□ -0.27
Vcam1P29533 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.37□□□□□ -0.27
Vcam1P29533 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.37□□□□□ -0.27
Vcam1P29533 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.37□□□□□ -0.27
Vcam1P29533 Gm37284-201ENSMUST00000193607 539 ntBASIC13.37□□□□□ -0.27
Vcam1P29533 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms