Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.05□□□□□ -0.48
Nfkb1P25799 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.05□□□□□ -0.48
Nfkb1P25799 Gm44506-201ENSMUST00000206278 965 ntBASIC12.05□□□□□ -0.48
Nfkb1P25799 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.05□□□□□ -0.48
Nfkb1P25799 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.05□□□□□ -0.48
Nfkb1P25799 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nfkb1P25799 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Snora73b-201ENSMUST00000083419 205 ntBASIC12.05□□□□□ -0.48
Nfkb1P25799 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.05□□□□□ -0.48
Nfkb1P25799 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.05□□□□□ -0.48
Nfkb1P25799 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nfkb1P25799 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Nfkb1P25799 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nfkb1P25799 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nfkb1P25799 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Nfkb1P25799 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Nfkb1P25799 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Nfkb1P25799 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.04□□□□□ -0.48
Nfkb1P25799 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nfkb1P25799 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.04□□□□□ -0.48
Nfkb1P25799 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.04□□□□□ -0.48
Nfkb1P25799 Gm6485-201ENSMUST00000160676 439 ntBASIC12.04□□□□□ -0.48
Nfkb1P25799 Gm23771-201ENSMUST00000178702 110 ntBASIC12.04□□□□□ -0.48
Nfkb1P25799 Gm6114-201ENSMUST00000182472 968 ntBASIC12.04□□□□□ -0.48
Nfkb1P25799 Gm27910-201ENSMUST00000185004 107 ntBASIC12.04□□□□□ -0.48
Nfkb1P25799 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.04□□□□□ -0.48
Nfkb1P25799 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nfkb1P25799 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.04□□□□□ -0.48
Nfkb1P25799 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.04□□□□□ -0.48
Nfkb1P25799 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.04□□□□□ -0.48
Nfkb1P25799 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.04□□□□□ -0.48
Nfkb1P25799 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.04□□□□□ -0.48
Nfkb1P25799 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nfkb1P25799 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nfkb1P25799 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nfkb1P25799 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.03□□□□□ -0.48
Nfkb1P25799 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.03□□□□□ -0.48
Nfkb1P25799 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nfkb1P25799 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nfkb1P25799 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.03□□□□□ -0.48
Nfkb1P25799 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.03□□□□□ -0.48
Nfkb1P25799 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nfkb1P25799 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Nfkb1P25799 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.03□□□□□ -0.48
Nfkb1P25799 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.03□□□□□ -0.48
Nfkb1P25799 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.03□□□□□ -0.48
Nfkb1P25799 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.03□□□□□ -0.48
Nfkb1P25799 Gm37299-201ENSMUST00000193951 826 ntBASIC12.03□□□□□ -0.48
Nfkb1P25799 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Gm44980-201ENSMUST00000205826 314 ntBASIC12.03□□□□□ -0.48
Nfkb1P25799 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.03□□□□□ -0.48
Nfkb1P25799 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.03□□□□□ -0.48
Nfkb1P25799 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nfkb1P25799 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms