Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.83□□□□□ -0.36
Pde6bP23440 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.83□□□□□ -0.36
Pde6bP23440 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Gm22920-201ENSMUST00000102175 109 ntBASIC12.83□□□□□ -0.36
Pde6bP23440 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.83□□□□□ -0.36
Pde6bP23440 Gm12516-201ENSMUST00000120819 385 ntBASIC12.83□□□□□ -0.36
Pde6bP23440 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.83□□□□□ -0.36
Pde6bP23440 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.83□□□□□ -0.36
Pde6bP23440 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.83□□□□□ -0.36
Pde6bP23440 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Gm4310-201ENSMUST00000177847 889 ntBASIC12.83□□□□□ -0.36
Pde6bP23440 Gm5706-201ENSMUST00000181525 993 ntBASIC12.83□□□□□ -0.36
Pde6bP23440 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.83□□□□□ -0.36
Pde6bP23440 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.83□□□□□ -0.36
Pde6bP23440 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pde6bP23440 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.83□□□□□ -0.36
Pde6bP23440 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pde6bP23440 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Pde6bP23440 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pde6bP23440 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6bP23440 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.82□□□□□ -0.36
Pde6bP23440 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.82□□□□□ -0.36
Pde6bP23440 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pde6bP23440 Gm12579-201ENSMUST00000118040 783 ntBASIC12.82□□□□□ -0.36
Pde6bP23440 Gm8731-201ENSMUST00000118088 412 ntBASIC12.82□□□□□ -0.36
Pde6bP23440 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.82□□□□□ -0.36
Pde6bP23440 Gm6485-201ENSMUST00000160676 439 ntBASIC12.82□□□□□ -0.36
Pde6bP23440 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.82□□□□□ -0.36
Pde6bP23440 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Mir7076-201ENSMUST00000183519 74 ntBASIC12.82□□□□□ -0.36
Pde6bP23440 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.82□□□□□ -0.36
Pde6bP23440 Gm9645-201ENSMUST00000197131 792 ntBASIC12.82□□□□□ -0.36
Pde6bP23440 Gm43186-201ENSMUST00000198130 824 ntBASIC12.82□□□□□ -0.36
Pde6bP23440 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.82□□□□□ -0.36
Pde6bP23440 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.82□□□□□ -0.36
Pde6bP23440 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pde6bP23440 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.82□□□□□ -0.36
Pde6bP23440 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pde6bP23440 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.82□□□□□ -0.36
Pde6bP23440 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pde6bP23440 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6bP23440 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.81□□□□□ -0.36
Pde6bP23440 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.81□□□□□ -0.36
Pde6bP23440 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Gm11949-201ENSMUST00000117640 372 ntBASIC12.81□□□□□ -0.36
Pde6bP23440 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.81□□□□□ -0.36
Pde6bP23440 Gm22138-201ENSMUST00000158748 128 ntBASIC12.81□□□□□ -0.36
Pde6bP23440 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms