Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
PdgfrbP05622 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
PdgfrbP05622 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
PdgfrbP05622 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
PdgfrbP05622 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.88□□□□□ -0.51
PdgfrbP05622 Gm15171-201ENSMUST00000122191 334 ntBASIC11.88□□□□□ -0.51
PdgfrbP05622 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.88□□□□□ -0.51
PdgfrbP05622 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.88□□□□□ -0.51
PdgfrbP05622 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Gm4310-201ENSMUST00000177847 889 ntBASIC11.88□□□□□ -0.51
PdgfrbP05622 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Mir7677-201ENSMUST00000184226 67 ntBASIC11.88□□□□□ -0.51
PdgfrbP05622 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Gm18038-201ENSMUST00000197900 485 ntBASIC11.88□□□□□ -0.51
PdgfrbP05622 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.88□□□□□ -0.51
PdgfrbP05622 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Gm270-201ENSMUST00000223010 976 ntBASIC11.88□□□□□ -0.51
PdgfrbP05622 Gm807-202ENSMUST00000224929 408 ntBASIC11.88□□□□□ -0.51
PdgfrbP05622 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.88□□□□□ -0.51
PdgfrbP05622 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.88□□□□□ -0.51
PdgfrbP05622 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PdgfrbP05622 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.87□□□□□ -0.51
PdgfrbP05622 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
PdgfrbP05622 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.87□□□□□ -0.51
PdgfrbP05622 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.87□□□□□ -0.51
PdgfrbP05622 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
PdgfrbP05622 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.87□□□□□ -0.51
PdgfrbP05622 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.87□□□□□ -0.51
PdgfrbP05622 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
PdgfrbP05622 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.87□□□□□ -0.51
PdgfrbP05622 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
PdgfrbP05622 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
PdgfrbP05622 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC11.87□□□□□ -0.51
PdgfrbP05622 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.87□□□□□ -0.51
PdgfrbP05622 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
PdgfrbP05622 Gm2383-201ENSMUST00000181461 807 ntBASIC11.87□□□□□ -0.51
PdgfrbP05622 Gm2260-201ENSMUST00000184965 657 ntBASIC11.87□□□□□ -0.51
PdgfrbP05622 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.87□□□□□ -0.51
PdgfrbP05622 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Gm2553-201ENSMUST00000215986 605 ntBASIC11.87□□□□□ -0.51
PdgfrbP05622 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.87□□□□□ -0.51
PdgfrbP05622 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.87□□□□□ -0.51
PdgfrbP05622 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
PdgfrbP05622 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
PdgfrbP05622 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PdgfrbP05622 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.87□□□□□ -0.51
PdgfrbP05622 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
PdgfrbP05622 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
PdgfrbP05622 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.86□□□□□ -0.51
PdgfrbP05622 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.86□□□□□ -0.51
PdgfrbP05622 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
PdgfrbP05622 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PdgfrbP05622 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms