Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
H3f3cP02301 Gm26448-201ENSMUST00000082446 203 ntBASIC10.07□□□□□ -0.8
H3f3cP02301 Mir433-201ENSMUST00000093564 124 ntBASIC10.07□□□□□ -0.8
H3f3cP02301 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
H3f3cP02301 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.07□□□□□ -0.8
H3f3cP02301 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.07□□□□□ -0.8
H3f3cP02301 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.07□□□□□ -0.8
H3f3cP02301 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.07□□□□□ -0.8
H3f3cP02301 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
H3f3cP02301 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.06□□□□□ -0.8
H3f3cP02301 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
H3f3cP02301 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
H3f3cP02301 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Gm14028-201ENSMUST00000117434 479 ntBASIC10.06□□□□□ -0.8
H3f3cP02301 Gm12997-201ENSMUST00000120207 640 ntBASIC10.06□□□□□ -0.8
H3f3cP02301 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.06□□□□□ -0.8
H3f3cP02301 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
H3f3cP02301 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.06□□□□□ -0.8
H3f3cP02301 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.06□□□□□ -0.8
H3f3cP02301 Gm9192-201ENSMUST00000183221 985 ntBASIC10.06□□□□□ -0.8
H3f3cP02301 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.06□□□□□ -0.8
H3f3cP02301 Gm9136-201ENSMUST00000193368 454 ntBASIC10.06□□□□□ -0.8
H3f3cP02301 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Gm18730-201ENSMUST00000218038 343 ntBASIC10.06□□□□□ -0.8
H3f3cP02301 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.06□□□□□ -0.8
H3f3cP02301 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
H3f3cP02301 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.06□□□□□ -0.8
H3f3cP02301 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.06□□□□□ -0.8
H3f3cP02301 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.06□□□□□ -0.8
H3f3cP02301 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
H3f3cP02301 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.06□□□□□ -0.8
H3f3cP02301 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
H3f3cP02301 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
H3f3cP02301 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.06□□□□□ -0.8
H3f3cP02301 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H3f3cP02301 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
H3f3cP02301 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
H3f3cP02301 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
H3f3cP02301 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H3f3cP02301 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H3f3cP02301 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H3f3cP02301 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H3f3cP02301 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H3f3cP02301 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H3f3cP02301 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H3f3cP02301 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
H3f3cP02301 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H3f3cP02301 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms