Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.86□□□□□ -0.19
Smarce1O54941 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.86□□□□□ -0.19
Smarce1O54941 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.86□□□□□ -0.19
Smarce1O54941 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.86□□□□□ -0.19
Smarce1O54941 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smarce1O54941 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smarce1O54941 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.86□□□□□ -0.19
Smarce1O54941 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Gm2991-201ENSMUST00000173338 480 ntBASIC13.86□□□□□ -0.19
Smarce1O54941 Gm8885-201ENSMUST00000189382 598 ntBASIC13.86□□□□□ -0.19
Smarce1O54941 Gm6621-201ENSMUST00000193251 772 ntBASIC13.86□□□□□ -0.19
Smarce1O54941 Gm43966-201ENSMUST00000203301 612 ntBASIC13.86□□□□□ -0.19
Smarce1O54941 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.86□□□□□ -0.19
Smarce1O54941 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Smarce1O54941 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Smarce1O54941 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.86□□□□□ -0.19
Smarce1O54941 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smarce1O54941 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarce1O54941 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.86□□□□□ -0.19
Smarce1O54941 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.85□□□□□ -0.19
Smarce1O54941 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.85□□□□□ -0.19
Smarce1O54941 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.85□□□□□ -0.19
Smarce1O54941 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarce1O54941 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smarce1O54941 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarce1O54941 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Gm27501-201ENSMUST00000183599 107 ntBASIC13.85□□□□□ -0.19
Smarce1O54941 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Smarce1O54941 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.85□□□□□ -0.19
Smarce1O54941 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.85□□□□□ -0.19
Smarce1O54941 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarce1O54941 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarce1O54941 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarce1O54941 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smarce1O54941 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.85□□□□□ -0.19
Smarce1O54941 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Smarce1O54941 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarce1O54941 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.84□□□□□ -0.19
Smarce1O54941 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarce1O54941 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.84□□□□□ -0.19
Smarce1O54941 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Smarce1O54941 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Smarce1O54941 Gm28937-201ENSMUST00000185413 695 ntBASIC13.84□□□□□ -0.19
Smarce1O54941 Gm29400-201ENSMUST00000187208 695 ntBASIC13.84□□□□□ -0.19
Smarce1O54941 Gm28662-201ENSMUST00000188446 695 ntBASIC13.84□□□□□ -0.19
Smarce1O54941 Gm28251-201ENSMUST00000188835 695 ntBASIC13.84□□□□□ -0.19
Smarce1O54941 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Gm37318-201ENSMUST00000194325 695 ntBASIC13.84□□□□□ -0.19
Smarce1O54941 Gm38017-201ENSMUST00000194768 695 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms