Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Gm29304-201ENSMUST00000186555 695 ntBASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Gm29223-201ENSMUST00000188867 695 ntBASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Gm37921-201ENSMUST00000194333 695 ntBASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.19□□□□□ -0.3
Syngap1F6SEU4 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.19□□□□□ -0.3
Syngap1F6SEU4 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Gm23680-201ENSMUST00000083162 164 ntBASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 AC107763.1-201ENSMUST00000226082 1365 ntBASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.19□□□□□ -0.3
Syngap1F6SEU4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Gm14234-201ENSMUST00000119539 845 ntBASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Gm13624-201ENSMUST00000120263 462 ntBASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Gm20414-201ENSMUST00000172918 646 ntBASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Gm18801-201ENSMUST00000186616 536 ntBASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Gm45575-201ENSMUST00000210283 548 ntBASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.18□□□□□ -0.3
Syngap1F6SEU4 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.18□□□□□ -0.3
Syngap1F6SEU4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syngap1F6SEU4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms