Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shank1D3YZU1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm13117-201ENSMUST00000120894 691 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm44882-201ENSMUST00000205702 802 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm13351-201ENSMUST00000118087 414 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm14395-201ENSMUST00000120494 563 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm10807-201ENSMUST00000177134 795 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm37852-201ENSMUST00000193027 350 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm29763-201ENSMUST00000205306 616 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.49□□□□□ -0.73
Shank1D3YZU1 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Shank1D3YZU1 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm15620-201ENSMUST00000122949 270 ntBASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm25554-201ENSMUST00000158075 113 ntBASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm18801-201ENSMUST00000186616 536 ntBASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.48□□□□□ -0.73
Shank1D3YZU1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms