Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Gm44545-201ENSMUST00000208262 746 ntBASIC11.45□□□□□ -0.58
Chd3B1AR17 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Chd3B1AR17 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.45□□□□□ -0.58
Chd3B1AR17 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Gm9645-201ENSMUST00000197131 792 ntBASIC11.45□□□□□ -0.58
Chd3B1AR17 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Gm44158-201ENSMUST00000203881 505 ntBASIC11.45□□□□□ -0.58
Chd3B1AR17 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.45□□□□□ -0.58
Chd3B1AR17 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.45□□□□□ -0.58
Chd3B1AR17 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.45□□□□□ -0.58
Chd3B1AR17 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Gm11246-201ENSMUST00000120880 345 ntBASIC11.44□□□□□ -0.58
Chd3B1AR17 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Gm42599-201ENSMUST00000201308 469 ntBASIC11.44□□□□□ -0.58
Chd3B1AR17 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chd3B1AR17 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd3B1AR17 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.44□□□□□ -0.58
Chd3B1AR17 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.44□□□□□ -0.58
Chd3B1AR17 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Chd3B1AR17 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.44□□□□□ -0.58
Chd3B1AR17 Mir7076-201ENSMUST00000183519 74 ntBASIC11.44□□□□□ -0.58
Chd3B1AR17 Gm44506-201ENSMUST00000206278 965 ntBASIC11.44□□□□□ -0.58
Chd3B1AR17 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.44□□□□□ -0.58
Chd3B1AR17 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd3B1AR17 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.44□□□□□ -0.58
Chd3B1AR17 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.44□□□□□ -0.58
Chd3B1AR17 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.44□□□□□ -0.58
Chd3B1AR17 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.44□□□□□ -0.58
Chd3B1AR17 Gm10254-201ENSMUST00000052888 867 ntBASIC11.44□□□□□ -0.58
Chd3B1AR17 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Chd3B1AR17 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Erich3-203ENSMUST00000189969 3460 ntBASIC11.43□□□□□ -0.58
Chd3B1AR17 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Chd3B1AR17 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.43□□□□□ -0.58
Chd3B1AR17 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 177.9 ms