Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.7□□□□□ -0.54
H2afb2S4R1M3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
H2afb2S4R1M3 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Mir8093-201ENSMUST00000185043 137 ntBASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Gm5982-201ENSMUST00000196234 512 ntBASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Gm8385-201ENSMUST00000058999 643 ntBASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Gm8420-201ENSMUST00000097103 598 ntBASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb2S4R1M3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Gm11663-201ENSMUST00000117888 290 ntBASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Gm18065-201ENSMUST00000221395 526 ntBASIC11.68□□□□□ -0.54
H2afb2S4R1M3 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.68□□□□□ -0.54
H2afb2S4R1M3 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.68□□□□□ -0.54
H2afb2S4R1M3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb2S4R1M3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms