Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.25□□□□□ -0.61
Cldn9Q9Z0S7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Gm37666-201ENSMUST00000194110 866 ntBASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Lect2-202ENSMUST00000225183 823 ntBASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn9Q9Z0S7 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Gm23949-201ENSMUST00000104027 127 ntBASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Gm24749-201ENSMUST00000157838 343 ntBASIC11.23□□□□□ -0.61
Cldn9Q9Z0S7 Gm26083-201ENSMUST00000157904 193 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms