Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gm7774-201ENSMUST00000200064 533 ntBASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gm5779-201ENSMUST00000218467 910 ntBASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gm44798-201ENSMUST00000208123 2410 ntBASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco4Q9JIS3 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms