Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.55□□□□□ -0.56
Lima1Q9ERG0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lima1Q9ERG0 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Gm12241-201ENSMUST00000118330 726 ntBASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Gm11222-201ENSMUST00000119005 738 ntBASIC11.54□□□□□ -0.56
Lima1Q9ERG0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Gm10254-201ENSMUST00000052888 867 ntBASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.54□□□□□ -0.56
Lima1Q9ERG0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.54□□□□□ -0.56
Lima1Q9ERG0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Erich3-203ENSMUST00000189969 3460 ntBASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lima1Q9ERG0 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Gm14247-201ENSMUST00000120950 237 ntBASIC11.53□□□□□ -0.56
Lima1Q9ERG0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms