Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx56Q9D0R4 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx56Q9D0R4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx56Q9D0R4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx56Q9D0R4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ddx56Q9D0R4 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx56Q9D0R4 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx56Q9D0R4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Gm4857-201ENSMUST00000192718 785 ntBASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Gm5982-201ENSMUST00000196234 512 ntBASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Gm18212-201ENSMUST00000211678 889 ntBASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Rgr-203ENSMUST00000225070 4704 ntBASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Ddx56Q9D0R4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Gm11663-201ENSMUST00000117888 290 ntBASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Gm14208-201ENSMUST00000119645 678 ntBASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Gm14017-201ENSMUST00000121934 386 ntBASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Mir8093-201ENSMUST00000185043 137 ntBASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Gm18730-201ENSMUST00000218038 343 ntBASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Gm7940-201ENSMUST00000218195 769 ntBASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Gm18065-201ENSMUST00000221395 526 ntBASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx56Q9D0R4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx56Q9D0R4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx56Q9D0R4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx56Q9D0R4 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ddx56Q9D0R4 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx56Q9D0R4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms