Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ssbp3Q9D032 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm38116-201ENSMUST00000193873 1533 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm23251-201ENSMUST00000103773 110 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm15207-201ENSMUST00000119259 442 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm13461-201ENSMUST00000120980 662 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm23699-201ENSMUST00000158835 135 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm20426-201ENSMUST00000173657 440 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm8815-201ENSMUST00000173809 620 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm37246-201ENSMUST00000192665 835 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm42599-201ENSMUST00000201308 469 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm18393-201ENSMUST00000208349 1131 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ssbp3Q9D032 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Map1b-203ENSMUST00000223725 2669 ntBASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ssbp3Q9D032 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms