Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Gm21769-201ENSMUST00000211922 111 ntBASIC13.74□□□□□ -0.21
Smc3Q9CW03 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.74□□□□□ -0.21
Smc3Q9CW03 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.74□□□□□ -0.21
Smc3Q9CW03 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.74□□□□□ -0.21
Smc3Q9CW03 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.74□□□□□ -0.21
Smc3Q9CW03 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.74□□□□□ -0.21
Smc3Q9CW03 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.73□□□□□ -0.21
Smc3Q9CW03 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Gm10254-201ENSMUST00000052888 867 ntBASIC13.73□□□□□ -0.21
Smc3Q9CW03 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.73□□□□□ -0.21
Smc3Q9CW03 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.73□□□□□ -0.21
Smc3Q9CW03 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc3Q9CW03 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.72□□□□□ -0.21
Smc3Q9CW03 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Gm32999-201ENSMUST00000192693 562 ntBASIC13.72□□□□□ -0.21
Smc3Q9CW03 Rprl1-202ENSMUST00000198476 238 ntBASIC13.72□□□□□ -0.21
Smc3Q9CW03 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Gm43962-201ENSMUST00000203898 190 ntBASIC13.72□□□□□ -0.21
Smc3Q9CW03 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smc3Q9CW03 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.72□□□□□ -0.21
Smc3Q9CW03 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Gm7399-201ENSMUST00000032395 858 ntBASIC13.72□□□□□ -0.21
Smc3Q9CW03 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.72□□□□□ -0.21
Smc3Q9CW03 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Smc3Q9CW03 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.72□□□□□ -0.21
Smc3Q9CW03 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.72□□□□□ -0.21
Smc3Q9CW03 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.72□□□□□ -0.21
Smc3Q9CW03 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc3Q9CW03 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms