Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Gm15198-201ENSMUST00000117283 177 ntBASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Gm5419-201ENSMUST00000119301 527 ntBASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Gm43118-201ENSMUST00000199149 775 ntBASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Gm5950-201ENSMUST00000213337 772 ntBASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Gm19309-201ENSMUST00000218295 205 ntBASIC11.5□□□□□ -0.57
Trim8Q99PJ2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Gm15610-201ENSMUST00000120584 195 ntBASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim8Q99PJ2 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms