Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm17420-201ENSMUST00000164753 153 ntBASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Gm3096-201ENSMUST00000185770 364 ntBASIC11.02□□□□□ -0.65
Nkd1Q99MH6 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Gm14644-201ENSMUST00000116671 647 ntBASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Gm12742-201ENSMUST00000117326 410 ntBASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.01□□□□□ -0.65
Nkd1Q99MH6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Gm31256-201ENSMUST00000194705 506 ntBASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkd1Q99MH6 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkd1Q99MH6 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nkd1Q99MH6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11□□□□□ -0.65
Nkd1Q99MH6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nkd1Q99MH6 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Nkd1Q99MH6 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd1Q99MH6 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11□□□□□ -0.65
Nkd1Q99MH6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nkd1Q99MH6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nkd1Q99MH6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nkd1Q99MH6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nkd1Q99MH6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nkd1Q99MH6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms