Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdha3Q91Y16 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdha3Q91Y16 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.27□□□□□ -0.44
Pcdha3Q91Y16 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.27□□□□□ -0.44
Pcdha3Q91Y16 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdha3Q91Y16 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdha3Q91Y16 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Pcdha3Q91Y16 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdha3Q91Y16 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Gm23200-201ENSMUST00000104379 132 ntBASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Mir7070-201ENSMUST00000183657 86 ntBASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Gm3332-201ENSMUST00000189337 928 ntBASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Gm38314-201ENSMUST00000195709 625 ntBASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Gm21811-201ENSMUST00000096485 930 ntBASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdha3Q91Y16 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Gm14724-201ENSMUST00000118400 537 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Gm25881-201ENSMUST00000157783 103 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Gm23085-201ENSMUST00000157849 293 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Gm25732-201ENSMUST00000175168 60 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdha3Q91Y16 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms