Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm26461-201ENSMUST00000175064 290 ntBASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gm26047-202ENSMUST00000198840 115 ntBASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gm18730-201ENSMUST00000218038 343 ntBASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Gm14724-201ENSMUST00000118400 537 ntBASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Gm12196-201ENSMUST00000120954 262 ntBASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Gm14017-201ENSMUST00000121934 386 ntBASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Gm8815-201ENSMUST00000173809 620 ntBASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Gm16505-201ENSMUST00000179981 232 ntBASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Gm18212-201ENSMUST00000211678 889 ntBASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb1Q91Y08 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Pcdhb1Q91Y08 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhb1Q91Y08 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhb1Q91Y08 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Gm11783-201ENSMUST00000119549 885 ntBASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Gm5714-201ENSMUST00000197343 566 ntBASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Gm2965-201ENSMUST00000198365 343 ntBASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms