Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Gm10807-201ENSMUST00000177134 795 ntBASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb6Q91XZ4 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm14071-201ENSMUST00000117817 509 ntBASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm15515-201ENSMUST00000117827 822 ntBASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm11439-201ENSMUST00000118598 409 ntBASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm16481-201ENSMUST00000119074 1227 ntBASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm12266-201ENSMUST00000120311 962 ntBASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm2383-201ENSMUST00000181461 807 ntBASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm27552-201ENSMUST00000183351 62 ntBASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm27844-201ENSMUST00000183613 62 ntBASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 AU022133-201ENSMUST00000200601 873 ntBASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 AC073947.1-201ENSMUST00000216991 649 ntBASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm7964-201ENSMUST00000051522 1378 ntBASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Gm18806-201ENSMUST00000207607 1775 ntBASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb6Q91XZ4 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm18734-201ENSMUST00000172937 808 ntBASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm38151-201ENSMUST00000195085 289 ntBASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm4482-201ENSMUST00000200876 742 ntBASIC11.99□□□□□ -0.49
Pcdhb6Q91XZ4 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms