Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Gm15547-201ENSMUST00000122152 333 ntBASIC10.88□□□□□ -0.67
H2afjQ8R1M2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Gm24845-201ENSMUST00000158034 109 ntBASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Gm30285-201ENSMUST00000214614 422 ntBASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Gm8420-201ENSMUST00000097103 598 ntBASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Gm11439-201ENSMUST00000118598 409 ntBASIC10.87□□□□□ -0.67
H2afjQ8R1M2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Gm3096-201ENSMUST00000185770 364 ntBASIC10.87□□□□□ -0.67
H2afjQ8R1M2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.87□□□□□ -0.67
H2afjQ8R1M2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Gm9368-201ENSMUST00000219348 831 ntBASIC10.87□□□□□ -0.67
H2afjQ8R1M2 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.87□□□□□ -0.67
H2afjQ8R1M2 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afjQ8R1M2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afjQ8R1M2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afjQ8R1M2 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afjQ8R1M2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
H2afjQ8R1M2 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afjQ8R1M2 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms