Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cchcr1Q8K2I2 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Gm43184-201ENSMUST00000197247 542 ntBASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Gm17827-201ENSMUST00000211825 742 ntBASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cchcr1Q8K2I2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Gm5616-201ENSMUST00000165252 384 ntBASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Gm8741-201ENSMUST00000174736 384 ntBASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Gm43758-201ENSMUST00000199500 367 ntBASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Gm807-202ENSMUST00000224929 408 ntBASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Cchcr1Q8K2I2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Mir8093-201ENSMUST00000185043 137 ntBASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 AY036118-201ENSMUST00000200021 923 ntBASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms