Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Gm12407-201ENSMUST00000180219 324 ntBASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Gm9211-201ENSMUST00000182882 975 ntBASIC11.98□□□□□ -0.49
Nup54Q8BTS4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Gm42997-202ENSMUST00000200321 985 ntBASIC11.98□□□□□ -0.49
Nup54Q8BTS4 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Gm44506-201ENSMUST00000206278 965 ntBASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Paupar-201ENSMUST00000194826 3482 ntBASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Gm11500-201ENSMUST00000118237 601 ntBASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Gm15352-201ENSMUST00000118696 270 ntBASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Gm11956-201ENSMUST00000119525 512 ntBASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.97□□□□□ -0.49
Nup54Q8BTS4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Gm37986-201ENSMUST00000193285 383 ntBASIC11.97□□□□□ -0.49
Nup54Q8BTS4 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Gm4978-201ENSMUST00000071565 801 ntBASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nup54Q8BTS4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Gm7150-201ENSMUST00000122032 981 ntBASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nup54Q8BTS4 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms