Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm11989-201ENSMUST00000117240 672 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm15198-201ENSMUST00000117283 177 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm11362-201ENSMUST00000118838 850 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm11700-201ENSMUST00000119409 403 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm2991-201ENSMUST00000173338 480 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm26956-201ENSMUST00000182176 986 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm38241-201ENSMUST00000192641 898 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm4607-201ENSMUST00000206649 577 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm6334-201ENSMUST00000207083 228 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf38Q8BI21 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf38Q8BI21 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms