Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trnp1Q80ZI1 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trnp1Q80ZI1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trnp1Q80ZI1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trnp1Q80ZI1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trnp1Q80ZI1 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Gm13284-201ENSMUST00000121020 547 ntBASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Gm16459-201ENSMUST00000121443 686 ntBASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Mir7035-201ENSMUST00000184713 82 ntBASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Gm7939-201ENSMUST00000201233 1050 ntBASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 BC080696-201ENSMUST00000202858 1218 ntBASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Gm5449-201ENSMUST00000081132 357 ntBASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trnp1Q80ZI1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Gm42511-201ENSMUST00000196160 234 ntBASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Gm42660-201ENSMUST00000197733 947 ntBASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.12□□□□□ -0.31
Trnp1Q80ZI1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trnp1Q80ZI1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trnp1Q80ZI1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trnp1Q80ZI1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trnp1Q80ZI1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trnp1Q80ZI1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trnp1Q80ZI1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trnp1Q80ZI1 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trnp1Q80ZI1 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.11□□□□□ -0.31
Trnp1Q80ZI1 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms