Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vrk1Q80X41 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vrk1Q80X41 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vrk1Q80X41 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vrk1Q80X41 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Vrk1Q80X41 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.23□□□□□ -0.61
Vrk1Q80X41 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Gm18367-201ENSMUST00000176139 600 ntBASIC11.22□□□□□ -0.61
Vrk1Q80X41 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.22□□□□□ -0.61
Vrk1Q80X41 Gm12407-201ENSMUST00000180219 324 ntBASIC11.22□□□□□ -0.61
Vrk1Q80X41 Gm8492-201ENSMUST00000182375 987 ntBASIC11.22□□□□□ -0.61
Vrk1Q80X41 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Gm3551-201ENSMUST00000190750 664 ntBASIC11.22□□□□□ -0.61
Vrk1Q80X41 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.22□□□□□ -0.61
Vrk1Q80X41 Gm43852-201ENSMUST00000202098 917 ntBASIC11.22□□□□□ -0.61
Vrk1Q80X41 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Gm6108-201ENSMUST00000208365 367 ntBASIC11.22□□□□□ -0.61
Vrk1Q80X41 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.22□□□□□ -0.61
Vrk1Q80X41 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vrk1Q80X41 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Vrk1Q80X41 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.21□□□□□ -0.61
Vrk1Q80X41 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.21□□□□□ -0.61
Vrk1Q80X41 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.21□□□□□ -0.61
Vrk1Q80X41 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Gm3150-201ENSMUST00000166418 204 ntBASIC11.21□□□□□ -0.61
Vrk1Q80X41 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.21□□□□□ -0.61
Vrk1Q80X41 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Gm6450-201ENSMUST00000200896 574 ntBASIC11.21□□□□□ -0.61
Vrk1Q80X41 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.21□□□□□ -0.61
Vrk1Q80X41 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.21□□□□□ -0.61
Vrk1Q80X41 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vrk1Q80X41 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vrk1Q80X41 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vrk1Q80X41 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vrk1Q80X41 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vrk1Q80X41 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vrk1Q80X41 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Vrk1Q80X41 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vrk1Q80X41 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vrk1Q80X41 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vrk1Q80X41 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.21□□□□□ -0.62
Vrk1Q80X41 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.21□□□□□ -0.62
Vrk1Q80X41 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vrk1Q80X41 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms