Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.85□□□□□ -0.35
Ush1gQ80T11 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.84□□□□□ -0.35
Ush1gQ80T11 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Gm8731-201ENSMUST00000118088 412 ntBASIC12.84□□□□□ -0.35
Ush1gQ80T11 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.84□□□□□ -0.35
Ush1gQ80T11 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.84□□□□□ -0.35
Ush1gQ80T11 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ush1gQ80T11 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ush1gQ80T11 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ush1gQ80T11 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ush1gQ80T11 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ush1gQ80T11 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ush1gQ80T11 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.83□□□□□ -0.36
Ush1gQ80T11 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1gQ80T11 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.83□□□□□ -0.36
Ush1gQ80T11 Gm26013-201ENSMUST00000104404 119 ntBASIC12.83□□□□□ -0.36
Ush1gQ80T11 Gm12628-201ENSMUST00000122193 382 ntBASIC12.83□□□□□ -0.36
Ush1gQ80T11 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Mir8115-201ENSMUST00000184992 119 ntBASIC12.83□□□□□ -0.36
Ush1gQ80T11 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Gm43520-201ENSMUST00000197996 164 ntBASIC12.83□□□□□ -0.36
Ush1gQ80T11 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.83□□□□□ -0.36
Ush1gQ80T11 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.83□□□□□ -0.36
Ush1gQ80T11 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ush1gQ80T11 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.83□□□□□ -0.36
Ush1gQ80T11 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.83□□□□□ -0.36
Ush1gQ80T11 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.83□□□□□ -0.36
Ush1gQ80T11 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1gQ80T11 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.83□□□□□ -0.36
Ush1gQ80T11 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ush1gQ80T11 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ush1gQ80T11 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms