Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Gm14724-201ENSMUST00000118400 537 ntBASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Gm8737-201ENSMUST00000122208 642 ntBASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Gm2965-201ENSMUST00000198365 343 ntBASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Gm43610-201ENSMUST00000199117 365 ntBASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Gm43962-201ENSMUST00000203898 190 ntBASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Gm26035-201ENSMUST00000083065 308 ntBASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prpf38bQ80SY5 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm12218-201ENSMUST00000117666 399 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm13549-201ENSMUST00000118339 796 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm5257-201ENSMUST00000121823 790 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm8100-201ENSMUST00000182906 988 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm45359-201ENSMUST00000210635 427 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms