Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.52□□□□□ -0.56
Scaf4Q6PFF0 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Scaf4Q6PFF0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scaf4Q6PFF0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Scaf4Q6PFF0 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scaf4Q6PFF0 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.52□□□□□ -0.56
Scaf4Q6PFF0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.52□□□□□ -0.56
Scaf4Q6PFF0 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.52□□□□□ -0.56
Scaf4Q6PFF0 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.52□□□□□ -0.56
Scaf4Q6PFF0 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Scaf4Q6PFF0 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Gm11989-201ENSMUST00000117240 672 ntBASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Gm11362-201ENSMUST00000118838 850 ntBASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Gm14660-201ENSMUST00000119809 575 ntBASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scaf4Q6PFF0 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms