Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rad54bQ6PFE3 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rad54bQ6PFE3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rad54bQ6PFE3 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.79□□□□□ -0.52
Rad54bQ6PFE3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Gm27501-201ENSMUST00000183599 107 ntBASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Gm27572-201ENSMUST00000183702 255 ntBASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 AY702102-202ENSMUST00000194651 1173 ntBASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Gm18062-201ENSMUST00000208020 547 ntBASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Gm18055-201ENSMUST00000208254 547 ntBASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rad54bQ6PFE3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rad54bQ6PFE3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rad54bQ6PFE3 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.77□□□□□ -0.52
Rad54bQ6PFE3 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rad54bQ6PFE3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rad54bQ6PFE3 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rad54bQ6PFE3 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rad54bQ6PFE3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rad54bQ6PFE3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rad54bQ6PFE3 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rad54bQ6PFE3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rad54bQ6PFE3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.77□□□□□ -0.52
Rad54bQ6PFE3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Gm12957-201ENSMUST00000117835 377 ntBASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Gm3329-201ENSMUST00000159873 556 ntBASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Gm38117-201ENSMUST00000194653 939 ntBASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Rgr-203ENSMUST00000225070 4704 ntBASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms