Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gli3Q61602 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Gli3Q61602 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gli3Q61602 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Gli3Q61602 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gli3Q61602 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gli3Q61602 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Gli3Q61602 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.37■□□□□ 0.05
Gli3Q61602 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gli3Q61602 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm13002-201ENSMUST00000119286 682 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Gm15702-201ENSMUST00000119680 444 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Gm14650-201ENSMUST00000120400 889 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC15.36■□□□□ 0.05
Gli3Q61602 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm9578-201ENSMUST00000182354 753 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Gm27149-201ENSMUST00000184716 1266 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Gm34248-201ENSMUST00000200027 474 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm45893-201ENSMUST00000211899 247 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Gm25514-201ENSMUST00000083860 135 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Gli3Q61602 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm5472-201ENSMUST00000178604 1678 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Gli3Q61602 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Gli3Q61602 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm5764-201ENSMUST00000118817 885 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Gm16480-201ENSMUST00000120439 832 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC15.36■□□□□ 0.05
Gli3Q61602 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm23479-201ENSMUST00000158876 122 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm21577-201ENSMUST00000190823 697 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Gm20802-201ENSMUST00000190832 698 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC15.36■□□□□ 0.05
Gli3Q61602 AC154585.1-201ENSMUST00000218917 997 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Gm18504-201ENSMUST00000220917 929 ntBASIC15.36■□□□□ 0.05
Gli3Q61602 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC15.36■□□□□ 0.05
Gli3Q61602 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gli3Q61602 Gm14005-209ENSMUST00000224993 1832 ntBASIC15.35■□□□□ 0.05
Gli3Q61602 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Gli3Q61602 AC122840.1-201ENSMUST00000220915 3334 ntBASIC15.35■□□□□ 0.05
Gli3Q61602 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC15.35■□□□□ 0.05
Gli3Q61602 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.35■□□□□ 0.05
Gli3Q61602 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.35■□□□□ 0.05
Gli3Q61602 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Gli3Q61602 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Gli3Q61602 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Gli3Q61602 Gm15720-201ENSMUST00000117133 282 ntBASIC15.35■□□□□ 0.05
Gli3Q61602 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Gm17147-201ENSMUST00000164176 432 ntBASIC15.35■□□□□ 0.05
Gli3Q61602 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Gli3Q61602 Gm24466-201ENSMUST00000179978 109 ntBASIC15.35■□□□□ 0.05
Gli3Q61602 Gm8960-201ENSMUST00000219787 788 ntBASIC15.35■□□□□ 0.05
Gli3Q61602 AC123061.1-201ENSMUST00000228021 999 ntBASIC15.35■□□□□ 0.05
Gli3Q61602 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Gli3Q61602 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Gli3Q61602 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Gli3Q61602 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Gli3Q61602 Gm42651-201ENSMUST00000199851 1339 ntBASIC15.35■□□□□ 0.05
Gli3Q61602 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gli3Q61602 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.35■□□□□ 0.05
Gli3Q61602 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gli3Q61602 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gli3Q61602 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gli3Q61602 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.34■□□□□ 0.05
Gli3Q61602 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gli3Q61602 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gli3Q61602 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gli3Q61602 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms