Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.27□□□□□ -0.61
ClpbQ60649 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Gm17931-201ENSMUST00000208132 634 ntBASIC11.27□□□□□ -0.61
ClpbQ60649 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.27□□□□□ -0.61
ClpbQ60649 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.27□□□□□ -0.61
ClpbQ60649 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ClpbQ60649 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.27□□□□□ -0.61
ClpbQ60649 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.27□□□□□ -0.61
ClpbQ60649 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.27□□□□□ -0.61
ClpbQ60649 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.27□□□□□ -0.61
ClpbQ60649 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.27□□□□□ -0.61
ClpbQ60649 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.27□□□□□ -0.61
ClpbQ60649 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpbQ60649 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
ClpbQ60649 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.26□□□□□ -0.61
ClpbQ60649 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.26□□□□□ -0.61
ClpbQ60649 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.26□□□□□ -0.61
ClpbQ60649 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
ClpbQ60649 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Gm23200-201ENSMUST00000104379 132 ntBASIC11.26□□□□□ -0.61
ClpbQ60649 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
ClpbQ60649 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
ClpbQ60649 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.26□□□□□ -0.61
ClpbQ60649 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
ClpbQ60649 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.26□□□□□ -0.61
ClpbQ60649 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.26□□□□□ -0.61
ClpbQ60649 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
ClpbQ60649 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.26□□□□□ -0.61
ClpbQ60649 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
ClpbQ60649 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.26□□□□□ -0.61
ClpbQ60649 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.26□□□□□ -0.61
ClpbQ60649 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.26□□□□□ -0.61
ClpbQ60649 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.26□□□□□ -0.61
ClpbQ60649 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
ClpbQ60649 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
ClpbQ60649 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.26□□□□□ -0.61
ClpbQ60649 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClpbQ60649 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
ClpbQ60649 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.25□□□□□ -0.61
ClpbQ60649 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
ClpbQ60649 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
ClpbQ60649 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
ClpbQ60649 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.25□□□□□ -0.61
ClpbQ60649 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpbQ60649 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
ClpbQ60649 Mir5120-201ENSMUST00000175020 78 ntBASIC11.25□□□□□ -0.61
ClpbQ60649 Gm25732-201ENSMUST00000175168 60 ntBASIC11.25□□□□□ -0.61
ClpbQ60649 Gm27552-201ENSMUST00000183351 62 ntBASIC11.25□□□□□ -0.61
ClpbQ60649 Gm27844-201ENSMUST00000183613 62 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms