Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm29615-201ENSMUST00000185371 697 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm28224-201ENSMUST00000186078 697 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm29001-201ENSMUST00000186177 697 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm28292-201ENSMUST00000186593 697 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm28101-201ENSMUST00000187608 697 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm29076-201ENSMUST00000187689 697 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm28302-201ENSMUST00000187931 697 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm28646-201ENSMUST00000188220 697 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm28205-201ENSMUST00000189177 697 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm29032-201ENSMUST00000189797 697 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm28695-201ENSMUST00000190300 697 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm37448-201ENSMUST00000192795 697 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm8913-201ENSMUST00000209491 641 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm2553-201ENSMUST00000215986 605 ntBASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Gm5616-201ENSMUST00000165252 384 ntBASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Gm8741-201ENSMUST00000174736 384 ntBASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5d-4Q5R1F6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms