Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Gm10263-201ENSMUST00000085163 300 ntBASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Upf3aQ3ULJ3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Gm4294-201ENSMUST00000105169 614 ntBASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Gm11801-201ENSMUST00000117807 746 ntBASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Gm9135-201ENSMUST00000182963 990 ntBASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Gm30671-201ENSMUST00000214898 318 ntBASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upf3aQ3ULJ3 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm11980-201ENSMUST00000121445 986 ntBASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm43163-201ENSMUST00000196571 442 ntBASIC12.3□□□□□ -0.44
Upf3aQ3ULJ3 Gm42599-201ENSMUST00000201308 469 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms