Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GabpaQ00422 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GabpaQ00422 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
GabpaQ00422 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GabpaQ00422 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GabpaQ00422 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.27□□□□□ -0.29
GabpaQ00422 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GabpaQ00422 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GabpaQ00422 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GabpaQ00422 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
GabpaQ00422 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
GabpaQ00422 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.26□□□□□ -0.29
GabpaQ00422 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.26□□□□□ -0.29
GabpaQ00422 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.26□□□□□ -0.29
GabpaQ00422 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.26□□□□□ -0.29
GabpaQ00422 Gm11628-201ENSMUST00000117568 171 ntBASIC13.26□□□□□ -0.29
GabpaQ00422 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Gm20495-201ENSMUST00000173902 235 ntBASIC13.26□□□□□ -0.29
GabpaQ00422 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.26□□□□□ -0.29
GabpaQ00422 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
GabpaQ00422 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.26□□□□□ -0.29
GabpaQ00422 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GabpaQ00422 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.26□□□□□ -0.29
GabpaQ00422 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.26□□□□□ -0.29
GabpaQ00422 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Cog3-203ENSMUST00000227473 4197 ntBASIC13.26□□□□□ -0.29
GabpaQ00422 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
GabpaQ00422 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
GabpaQ00422 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.26□□□□□ -0.29
GabpaQ00422 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.26□□□□□ -0.29
GabpaQ00422 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GabpaQ00422 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.25□□□□□ -0.29
GabpaQ00422 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
GabpaQ00422 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.25□□□□□ -0.29
GabpaQ00422 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
GabpaQ00422 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
GabpaQ00422 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Gm4294-201ENSMUST00000105169 614 ntBASIC13.25□□□□□ -0.29
GabpaQ00422 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.25□□□□□ -0.29
GabpaQ00422 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.25□□□□□ -0.29
GabpaQ00422 Gm12247-201ENSMUST00000117585 670 ntBASIC13.25□□□□□ -0.29
GabpaQ00422 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.25□□□□□ -0.29
GabpaQ00422 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.25□□□□□ -0.29
GabpaQ00422 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Mir6958-201ENSMUST00000184207 73 ntBASIC13.25□□□□□ -0.29
GabpaQ00422 Gm28324-201ENSMUST00000187913 264 ntBASIC13.25□□□□□ -0.29
GabpaQ00422 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.25□□□□□ -0.29
GabpaQ00422 Gm37028-201ENSMUST00000194276 107 ntBASIC13.25□□□□□ -0.29
GabpaQ00422 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.25□□□□□ -0.29
GabpaQ00422 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.25□□□□□ -0.29
GabpaQ00422 Gm45594-201ENSMUST00000211717 241 ntBASIC13.25□□□□□ -0.29
GabpaQ00422 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.25□□□□□ -0.29
GabpaQ00422 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.25□□□□□ -0.29
GabpaQ00422 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.25□□□□□ -0.29
GabpaQ00422 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GabpaQ00422 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms