Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.97□□□□□ -0.65
Six5P70178 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Gm14028-201ENSMUST00000117434 479 ntBASIC10.97□□□□□ -0.65
Six5P70178 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Gm25881-201ENSMUST00000157783 103 ntBASIC10.97□□□□□ -0.65
Six5P70178 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.97□□□□□ -0.65
Six5P70178 Gm8100-201ENSMUST00000182906 988 ntBASIC10.97□□□□□ -0.65
Six5P70178 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Gm4482-201ENSMUST00000200876 742 ntBASIC10.97□□□□□ -0.65
Six5P70178 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.97□□□□□ -0.65
Six5P70178 AC154532.1-201ENSMUST00000227860 965 ntBASIC10.97□□□□□ -0.65
Six5P70178 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.97□□□□□ -0.65
Six5P70178 Mir433-201ENSMUST00000093564 124 ntBASIC10.97□□□□□ -0.65
Six5P70178 Gm21811-201ENSMUST00000096485 930 ntBASIC10.97□□□□□ -0.65
Six5P70178 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.97□□□□□ -0.65
Six5P70178 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.97□□□□□ -0.65
Six5P70178 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Six5P70178 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Six5P70178 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Six5P70178 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Six5P70178 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Six5P70178 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.96□□□□□ -0.65
Six5P70178 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Six5P70178 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Six5P70178 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.96□□□□□ -0.65
Six5P70178 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.96□□□□□ -0.65
Six5P70178 Gm12501-201ENSMUST00000119163 529 ntBASIC10.96□□□□□ -0.65
Six5P70178 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Six5P70178 Gm14277-201ENSMUST00000121195 360 ntBASIC10.96□□□□□ -0.65
Six5P70178 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.96□□□□□ -0.65
Six5P70178 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.96□□□□□ -0.65
Six5P70178 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Six5P70178 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Gm28686-201ENSMUST00000187404 609 ntBASIC10.96□□□□□ -0.65
Six5P70178 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.96□□□□□ -0.65
Six5P70178 Gm5982-201ENSMUST00000196234 512 ntBASIC10.96□□□□□ -0.65
Six5P70178 Gm5714-201ENSMUST00000197343 566 ntBASIC10.96□□□□□ -0.65
Six5P70178 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.96□□□□□ -0.65
Six5P70178 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Six5P70178 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Six5P70178 Gm7940-201ENSMUST00000218195 769 ntBASIC10.96□□□□□ -0.65
Six5P70178 Gm18065-201ENSMUST00000221395 526 ntBASIC10.96□□□□□ -0.65
Six5P70178 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.96□□□□□ -0.65
Six5P70178 Paupar-201ENSMUST00000194826 3482 ntBASIC10.96□□□□□ -0.66
Six5P70178 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.96□□□□□ -0.66
Six5P70178 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms