Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Lhx3P50481 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Lhx3P50481 Paupar-201ENSMUST00000194826 3482 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Lhx3P50481 Gm12419-201ENSMUST00000116649 636 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.84□□□□□ -0.51
Lhx3P50481 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Lhx3P50481 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 Gm23045-201ENSMUST00000175041 96 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 Gm4654-201ENSMUST00000183305 982 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 Gm43186-201ENSMUST00000198130 824 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Lhx3P50481 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lhx3P50481 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Olfr584-201ENSMUST00000098210 964 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.84□□□□□ -0.51
Lhx3P50481 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.84□□□□□ -0.51
Lhx3P50481 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx3P50481 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lhx3P50481 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lhx3P50481 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Lhx3P50481 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.83□□□□□ -0.51
Lhx3P50481 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.83□□□□□ -0.52
Lhx3P50481 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Lhx3P50481 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.83□□□□□ -0.52
Lhx3P50481 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.83□□□□□ -0.52
Lhx3P50481 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lhx3P50481 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.83□□□□□ -0.52
Lhx3P50481 Gm11949-201ENSMUST00000117640 372 ntBASIC11.83□□□□□ -0.52
Lhx3P50481 Gm16166-201ENSMUST00000118291 787 ntBASIC11.83□□□□□ -0.52
Lhx3P50481 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.83□□□□□ -0.52
Lhx3P50481 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.83□□□□□ -0.52
Lhx3P50481 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Gm15881-201ENSMUST00000148792 942 ntBASIC11.83□□□□□ -0.52
Lhx3P50481 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.83□□□□□ -0.52
Lhx3P50481 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.83□□□□□ -0.52
Lhx3P50481 Gm3786-201ENSMUST00000202659 378 ntBASIC11.83□□□□□ -0.52
Lhx3P50481 Gm8574-201ENSMUST00000203207 924 ntBASIC11.83□□□□□ -0.52
Lhx3P50481 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.83□□□□□ -0.52
Lhx3P50481 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.83□□□□□ -0.52
Lhx3P50481 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lhx3P50481 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lhx3P50481 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.83□□□□□ -0.52
Lhx3P50481 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Lhx3P50481 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lhx3P50481 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.83□□□□□ -0.52
Lhx3P50481 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx3P50481 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms